Daisuke Kihara
Daisuke Kihara
Associate Professor of Biological Sciences
Associate Professor of Computer Science

Joined department: 2003

Education:
BS, Biochemistry
University of Tokyo (1994)
MS, Bioinformatics
Kyoto University (1996)
PhD, Bioinformatics
Kyoto University (1999)

Dr. Kihara's research interest is in the area of bioinformatics. In the last decade, a large amount of biological data, such as genome/protein sequences, protein 3D structures, and pathway data have become available. This data now enables us to employ comprehensive analysis of relationship between protein sequence, structure and function, interactions, evolution of protein families, pathways, and organisms. Especially, he is focusing on developing computational methods to predict and analyze protein structure/function, protein-protein docking, pathway structure, and their applications in genome-scale or pathway/network scale. He has worked recently on protein structure prediction, protein global/local shape comparison, development of prediction method of transmembrane proteins, and its application to genome sequences.

Selected Publications
La D, Kong M, Hoffman W, Choi YI, Kihara D., "Predicting permanent and transient protein-protein interfaces.", Proteins, 2012, doi: 10.1002/prot.24235.
Esquivel-Rodriguez J, Yang YD, Kihara D., "Multi-LZerD: multiple protein docking for asymmetric complexes.", Proteins, 2012;80(7):1818-1833.
Esquivel-Rodriguez J, Kihara D., "Fitting multimeric protein complexes into electron microscopy maps using 3D Zernike descriptors.", J Phys Chem B, 2012;116(23):6854-6861.
Research Funding
Daisuke Kihara, Identification of protein-metabolite interactome, National Institutes of Health, 5/1/2011-4/30/2015.
Daisuke Kihara, Template-Based Protein Structure Prediction Beyond Sequence Homology, National Science Foundation, 7/1/2008-6/30/2013.
Last Updated: June 27, 2013 11:49am
Contact Information

Office: LWSN 1208
Phone: 49-45004

Fax: +1 765-494-0739

Send Mail My Homepage