Narada

Narada is a software tool that provides a user friendly interface to project species-specific molecular interaction data onto the space of functional annotation and identify over-represented pathways of functional attributes.

papers

J.Pandey, M. Koyuturk, Y. Kim, W. Szpankowski, S. Subramaniam, A. Grama, Functional Annotation of Regulatory Pathways, 15th Intl. Conf. Intelligent Systems for Molecular Biology / 6th European Conf. Computational Biology (ISMB/ECCB'07), pubmed

J.Pandey, M. Koyuturk, W. Szpankowski, A. Grama, A statistical model for functional characterization of regulatory pathways, Workshop on Data Mining for Biomedical Informatics, 7th SIAM Intl. Conf. Data Mining (SDM'07), 2007.

J.Pandey, M. Koyuturk, W. Szpankowski, A. Grama, Annotating Pathways in Interaction Networks, in press, PSB'08.

J.Pandey, M. Koyuturk, S. Subramaniam, A. Grama, Generalizing Molecular Annotations to Pathways in Interaction Networks, manuscript in preparation.